STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO15746.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
ARO13995.1
Rhomboid family protein.
 
    0.762
ARO14085.1
Hypothetical protein.
  
     0.756
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
     0.754
ARO14219.1
Divergent polysaccharide deacetylase family.
  
     0.743
ARO13739.1
Hypothetical protein.
  
     0.737
pmbA
PmbA protein.
       0.704
ARO14038.1
Hypothetical protein.
  
     0.692
ARO15076.1
Hypothetical protein.
  
     0.692
slyX
SlyX protein.
  
     0.687
ARO15576.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.