STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO15757.1Two component transcriptional regulator, winged helix family protein. (230 aa)    
Predicted Functional Partners:
ybdK
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.860
phoR
Two-component sensor histidine kinase.
 
 0.822
tctE
Two-component system, OmpR family, sensor histidine kinase TctE.
 
 
 0.745
kdpD
Two-component system, OmpR family, sensor histidine kinase KdpD.
 
 
 0.739
envZ
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.675
regB
Two-component system, sensor histidine kinase RegB.
 
 
 0.674
ARO15758.1
Hypothetical protein.
 
     0.619
cckA
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
 0.585
xthA-2
Exodeoxyribonuclease III.
  
  
 0.559
regA
Photosynthetic apparatus regulatory protein RegA.
  
 
 0.513
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.