STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO15760.1Lipid A oxidase (Involved in formation of 2-aminogluconate) protein. (222 aa)    
Predicted Functional Partners:
ARO15156.1
Protein tyrosine/serine phosphatase.
  
     0.758
ARO14234.1
Hypothetical protein.
  
     0.737
ccmD
Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.690
ARO15748.1
Lipoprotein yjbH.
  
    0.686
ARO14907.1
Hypothetical protein.
  
     0.665
ARO15677.1
Hypothetical protein.
  
     0.654
ARO14877.1
Hypothetical protein.
   
    0.632
abrB
Regulator of aidB expression; Inner membrane protein.
  
     0.616
ARO15226.1
Hypothetical protein.
  
     0.599
ARO15749.1
Hypothetical protein.
  
     0.580
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.