STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO15768.1Hemolysin-type calcium-binding region. (392 aa)    
Predicted Functional Partners:
ARO14017.1
Hypothetical protein.
 
 
 0.792
ARO15637.1
Glycosyl transferase family 14.
  
     0.771
ARO15638.1
Hypothetical protein.
  
     0.763
ARO15639.1
Hypothetical protein.
  
     0.761
ARO15643.1
ABC transporter, permease protein.
  
     0.751
ARO14639.1
Hypothetical protein.
  
     0.743
ARO13973.1
Hypothetical protein.
  
     0.739
ARO15636.1
Hypothetical protein.
  
     0.738
ARO14973.1
Glycosyl transferase family 14.
  
     0.732
ARO14974.1
Hypothetical protein.
  
     0.724
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.