STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO15790.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
mepA
Penicillin-insensitive murein endopeptidase.
       0.863
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
     0.720
yhhQ
Membrane protein, putative; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.717
yggT
YGGT family protein.
       0.687
ARO14764.1
Hypothetical protein.
  
     0.663
recQ
ATP-dependent DNA helicase RecQ.
       0.624
ARO14038.1
Hypothetical protein.
  
     0.621
yaeJ
Class I peptide chain release factor.
       0.615
ARO13668.1
Hypothetical protein.
  
     0.595
ARO14912.1
Hypothetical protein.
  
     0.594
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.