STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFD07908.1Nitrite reductase, copper-containing; PFAM: Multicopper oxidase; Cytochrome c. (476 aa)    
Predicted Functional Partners:
AFD06477.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.997
AFD07938.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 0.988
AFD05649.1
Cbb3-type cytochrome oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 0.978
AFD08375.1
Fe-S-cluster-containing hydrogenase subunit.
  
 
 0.959
AFD07909.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   
 0.951
AFD07042.1
Putative anaerobic dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.933
AFD05463.1
Cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region.
  
 
 0.932
nrfA
Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
   
 
 0.930
AFD07054.1
Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily.
 
  
 0.930
AFD07053.1
Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily.
 
  
 0.927
Your Current Organism:
Solitalea canadensis
NCBI taxonomy Id: 929556
Other names: S. canadensis DSM 3403, Solitalea canadensis DSM 3403, Solitalea canadensis IFO 15130, Solitalea canadensis NBRC 15130, Solitalea canadensis str. DSM 3403, Solitalea canadensis strain DSM 3403
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