STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK01672.1Hypothetical protein; InterPro IPR019734; KEGG: fjo:Fjoh_0660 hypothetical protein; SPTR: Putative uncharacterized protein. (747 aa)    
Predicted Functional Partners:
AFK01673.1
KEGG: fjo:Fjoh_0661 hypothetical protein; SPTR: Hypothetical lipoprotein.
     0.955
AFK02469.1
KEGG: shg:Sph21_1433 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.805
AFK01671.1
KEGG: ptm:GSPATT00030916001 hypothetical protein; SPTR: Chromosome undetermined scaffold_119, whole genome shotgun sequence.
       0.773
AFK01674.1
KEGG: sli:Slin_2547 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFK01670.1
Transposase IS4 family protein; PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: mac:MA2835 transposase; PFAM: Transposase, IS4-like; SPTR: IS5 family transposase.
       0.516
AFK01927.1
Hypothetical protein; COGs: COG0419 ATPase involved in DNA repair; KEGG: mtt:Ftrac_2994 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.515
AFK01675.1
tRNA modification GTPase mnmE; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: dfe:Dfer_0089 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein.
       0.494
AFK01926.1
Hypothetical protein; InterPro IPR003961; KEGG: cly:Celly_3098 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein.
  
     0.489
AFK04475.1
PFAM: Arginine-tRNA-protein transferase, C terminus; COGs: COG2935 Putative arginyl-tRNA:protein arginylyltransferase; InterPro IPR007472; KEGG: chu:CHU_2143 arginyl-tRNA:protein arginylyltransferase; PFAM: Arginine-tRNA-protein transferase, C-terminal; SPTR: Arginyl-tRNA:protein arginylyltransferase.
  
     0.482
AFK04200.1
PFAM: Protein of unknown function (DUF3127); KEGG: cch:Cag_0968 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.475
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.