STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK01792.1PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; HAMAP: Protein fdhD; InterPro IPR003786; KEGG: sli:Slin_3157 formate dehydrogenase family accessory protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD; SPTR: Protein FdhD homolog; TIGRFAM: Formate dehydrogenase, subunit FdhD. (279 aa)    
Predicted Functional Partners:
AFK01791.1
Oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase A chain; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit.
 
 0.935
AFK03137.1
PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR006638:IPR013483:IPR007197:IPR010505; KEGG: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A.
  
 0.769
AFK02882.1
Quinol:cytochrome c oxidoreductase IroN-sulfur protein precursor; PFAM: Molydopterin dinucleotide binding domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; KEGG: lby:Lbys_2185 quinol:cytochrome c oxidoreductase IroN-sulfur protein precursor; SPTR: Quinol:cytochrome c oxidoreductase iron-sulfur protein.
  
 
 0.536
AFK01793.1
PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR004106:IPR001375; KEGG: sli:Slin_5257 prolyl oligopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Prolyl oligopeptidase; manually curated.
       0.518
AFK03448.1
Hypothetical protein; COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: sli:Slin_2808 hypothetical protein; SPTR: Molybdenum cofactor biosynthesis protein C.
 
 
 
 0.512
AFK03449.1
PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: molybdenum cofactor biosynthesis protein C; PFAM: Molybdopterin cofactor biosynthesis MoaC region; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region.
 
  
 0.509
AFK03344.1
Molybdopterin dinucleotide-binding region; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006657; KEGG: nitrate reductase; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; SPTR: Oxidoreductase, molybdopterin-binding.
 
 
 0.500
AFK03155.1
Molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: molybdenum cofactor synthesis domain-containing protein; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis MoeA protein; TIGRFAM: Molybdenum cofactor synthesis.
 
   
 0.485
AFK03446.1
PFAM: MoaE protein; COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: molybdopterin biosynthesis MoaE protein; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin biosynthesis MoaE protein.
 
  
 0.471
AFK03231.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: gob:Gobs_4247 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Molybdopterin biosynthesis protein.
 
   
 0.463
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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