STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK01917.1GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: azo:azo3635 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase. (139 aa)    
Predicted Functional Partners:
AFK01916.1
Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: dfe:Dfer_2045 protein of unknown function DUF6 transmembrane; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein.
       0.773
AFK01918.1
Hypothetical protein; COGs: COG3467 flavin-nucleotide-binding protein; KEGG: dfe:Dfer_1192 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.718
AFK01915.1
PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR004839; KEGG: dfe:Dfer_1191 transcriptional regulator, GntR family with aminotransferase domain; PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family with aminotransferase domain.
     
 0.556
AFK04523.1
PFAM: Protein of unknown function (DUF1778); COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: lpp:lpp2984 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: Putative uncharacterized protein.
 
 
   0.555
AFK01919.1
PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fps:FP0675 PadR family transcriptional regulator; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: PadR family transcriptional regulator.
       0.468
AFK01920.1
PFAM: Protein of unknown function (DUF1700); SPTR: Putative uncharacterized protein.
       0.464
AFK01921.1
Alpha/beta hydrolase fold containing protein; PFAM: X-Pro dipeptidyl-peptidase (S15 family); COGs: COG2936 acyl esterase; InterPro IPR000073; KEGG: hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.
       0.464
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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