STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK01942.1ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: sli:Slin_2648 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1. (520 aa)    
Predicted Functional Partners:
AFK01943.1
PFAM: Fatty acid elongase 3-ketoacyl-CoA synthase 1; InterPro IPR009834:IPR010651; KEGG: putative integral membrane protein; putative sugar permease; SPTR: Putative integral membrane protein; putative sugar permease.
 
     0.865
AFK02203.1
PFAM: Protein of unknown function (DUF3179); KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.590
AFK01940.1
Ribokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611:IPR011877; KEGG: pdi:BDI_1657 ribokinase; PFAM: Carbohydrate/purine kinase; SPTR: Ribokinase; TIGRFAM: Ribokinase, bacterial.
 
   
 0.542
AFK01860.1
Hypothetical protein; PFAM: BNR/Asp-box repeat; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.514
AFK01941.1
PFAM: VanZ like family; InterPro IPR006976; KEGG: cac:CA_C0829 hypothetical protein; PFAM: VanZ like protein; SPTR: Uncharacterized conserved membrane protein, similar to MDR (VANZ) ORF of Enterococcus.
       0.459
AFK03327.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: cytochrome c, class I; PFAM: Cytochrome c, class I; SPTR: Putative uncharacterized protein.
  
     0.449
AFK03931.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
AFK05267.1
KEGG: plm:Plim_2979 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.442
AFK01569.1
PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: pdi:BDI_3797 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein.
  
     0.428
AFK01969.1
PFAM: Protein of unknown function (DUF1569); KEGG: psn:Pedsa_1903 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.418
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.