STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02017.1PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: dfe:Dfer_2161 WD40 domain protein beta propeller; PFAM: WD40-like Beta Propeller; SPTR: WD40 domain protein beta Propeller. (349 aa)    
Predicted Functional Partners:
AFK03195.1
Putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: dfe:Dfer_3688 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes.
  
     0.597
AFK02930.1
KEGG: sli:Slin_0660 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  0.574
AFK02450.1
Putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: sli:Slin_3226 hypothetical protein; SPTR: Putative membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes.
  
     0.569
AFK02016.1
Peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: dfe:Dfer_3655 peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Peptidase S9B dipeptidylpeptidase IV domain protein.
  
    0.546
AFK03655.1
KEGG: dfe:Dfer_2628 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.496
AFK04628.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: sli:Slin_2542 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB domain protein.
  
   0.496
AFK03196.1
PFAM: PKD domain; InterPro IPR000601; KEGG: lby:Lbys_2954 hypothetical protein; PFAM: PKD; SPTR: Putative uncharacterized protein.
  
 
  0.493
AFK04916.1
KEGG: sli:Slin_1476 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.479
AFK04740.1
PFAM: Domain of unknown function (DUF303); InterPro IPR005181; KEGG: sli:Slin_5096 hypothetical protein; PFAM: Protein of unknown function DUF303, acetylesterase putative; SPTR: Putative uncharacterized protein.
  
 
  0.471
AFK04247.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0346 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug.
  
  
  0.468
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.