STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02047.1PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: lby:Lbys_2090 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28. (513 aa)    
Predicted Functional Partners:
AFK02048.1
KEGG: sli:Slin_2806 plasmid-related protein; SPTR: Putative plasmid-related protein.
       0.527
AFK01820.1
Peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: lby:Lbys_2150 peptidase s9b dipeptidylpeptidase IV domain protein; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Peptidase S9B dipeptidylpeptidase IV domain protein.
  
    0.467
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.