STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02052.1PFAM: CotH protein; COGs: COG5337 Spore coat assembly protein; InterPro IPR014867; KEGG: spore coat protein CotH; PFAM: Spore coat protein CotH; SPTR: Putative uncharacterized protein. (452 aa)    
Predicted Functional Partners:
AFK02055.1
KEGG: dal:Dalk_4019 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.822
AFK02054.1
VTC domain-containing protein; PFAM: VTC domain; InterPro IPR018966; KEGG: bth:BT_3497 hypothetical protein; PFAM: VTC domain; SPTR: Peptidase aspartic, active site.
 
     0.793
AFK04373.1
Transcriptional regulator, SARP family; PFAM: Bacterial transcriptional activator domain; COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR019734:IPR001440; KEGG: bbt:BBta_1607 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
  
     0.592
AFK03733.1
PFAM: Domain of unknown function DUF11; Cna protein B-type domain; TIGRFAM: conserved repeat domain; InterPro IPR008454:IPR001434; KEGG: sli:Slin_3586 hypothetical protein; PFAM: Protein of unknown function DUF11; Collagen-binding surface protein Cna-like, B region; SPTR: Conserved repeat domain protein; TIGRFAM: Protein of unknown function DUF11.
  
    0.558
AFK04432.1
KEGG: ang:ANI_1_2070014 hypothetical protein; SPTR: Pc22g23380 protein.
  
     0.552
AFK04326.1
KEGG: shg:Sph21_3498 VirE protein; SPTR: Putative uncharacterized protein.
  
     0.549
AFK02504.1
KEGG: ppn:Palpr_1085 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.516
AFK02051.1
Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family.
       0.494
AFK02050.1
PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_3725 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.
 
     0.439
AFK02053.1
Hypothetical protein.
       0.425
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.