STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02111.1PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: sli:Slin_3402 haloacid dehalogenase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase domain protein hydrolase. (246 aa)    
Predicted Functional Partners:
AFK02112.1
PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR017741; KEGG: sli:Slin_3401 FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase TIGR03364; TIGRFAM: FAD-dependent oxidoreductase, HpnW.
     0.956
AFK03890.1
KEGG: lby:Lbys_2383 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.738
AFK02113.1
KEGG: dfe:Dfer_3091 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.737
AFK02107.1
Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: phosphonate degradation operons associated HDIG domain protein; uncharacterized domain HDIG; COGs: COG4341 HD phosphohydrolase; InterPro IPR006675; KEGG: sli:Slin_3397 metal dependent phosphohydrolase; SPTR: Phosphonate degradation operons associated HDIG domain protein; TIGRFAM: HDIG.
 
     0.680
AFK02108.1
KEGG: sli:Slin_3399 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.659
AFK02109.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: sli:Slin_3400 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
 
     0.651
AFK03137.1
PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR006638:IPR013483:IPR007197:IPR010505; KEGG: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A.
  
    0.573
AFK02110.1
KEGG: chu:CHU_3673 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.509
AFK03650.1
HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912:IPR006383; KEGG: dfe:Dfer_4690 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, cataly [...]
  
  
 0.441
AFK04725.1
Malic protein NAD-binding protein; PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: malic protein NAD-binding protein; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SPTR: Allosteric NADP-dependent malic enzyme.
  
 
 0.421
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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