STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02132.1KEGG: sli:Slin_6618 hypothetical protein; SPTR: Putative uncharacterized protein. (156 aa)    
Predicted Functional Partners:
AFK02131.1
KEGG: dfe:Dfer_2944 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.754
AFK02133.1
KEGG: lby:Lbys_0476 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.576
AFK02130.1
PFAM: Aminotransferase class I and II; COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR004839; KEGG: glo:Glov_2977 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II.
       0.454
AFK02129.1
MTA/SAH nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845:IPR010049; KEGG: sli:Slin_0223 adenosylhomocysteine nucleosidase; PFAM: Nucleoside phosphorylase; SPTR: Adenosylhomocysteine nucleosidase; TIGRFAM: MTA/SAH nucleosidase.
       0.443
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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