STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02196.1Hexapeptide repeat-containing transferase; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: pol:Bpro_3188 hexapaptide repeat-containing transferase; SPTR: Bacterial transferase family protein. (161 aa)    
Predicted Functional Partners:
AFK04924.1
PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: dfe:Dfer_4665 carbonate dehydratase; PFAM: Carbonic anhydrase; SPTR: Carbonic anhydrase.
    
 
 0.714
AFK02197.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910:IPR000531; KEGG: sli:Slin_4665 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.
       0.545
AFK02198.1
KEGG: gfo:GFO_1536 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.545
AFK02641.1
COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: sli:Slin_5928 GAF domain-containing protein; PFAM: GAF; SPTR: GAF domain-containing protein.
      0.480
AFK02195.1
PFAM: PAP2 superfamily; KEGG: phosphoesterase PA-phosphatase-like protein; SPTR: Putative uncharacterized protein.
       0.435
AFK04174.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: cpf:CPF_0453 glyoxalase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
 
    0.430
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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