STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02445.1PFAM: Family of unknown function (DUF706); InterPro IPR007828; KEGG: cao:Celal_0454 inositol oxygenase; PFAM: Protein of unknown function DUF706; SPTR: Inositol oxygenase. (320 aa)    
Predicted Functional Partners:
AFK01593.1
PFAM: Inositol monophosphatase family; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: sli:Slin_2273 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol monophosphatase.
   
 
 0.912
AFK03985.1
Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: sli:Slin_5067 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein.
   
 
  0.901
AFK05266.1
Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_09056 putative NADH-dependent dihydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: NADH-dependent dehydrogenase.
   
 
  0.901
AFK01875.1
PFAM: Aldo/keto reductase family; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: syn:slr0942 aldehyde reductase; PFAM: Aldo/keto reductase; SPTR: Aldehyde reductase.
 
 
 
 0.812
AFK03834.1
PFAM: Glucuronate isomerase; COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: lby:Lbys_1618 D-glucuronate isomerase; PFAM: Uronate isomerase; SPTR: Uronate isomerase.
    
 0.806
AFK02444.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0022 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
 
     0.672
AFK02443.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor.
 
     0.518
AFK03581.1
PFAM: Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR011583:IPR001223; KEGG: shg:Sph21_2699 chitinase; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II; SPTR: Candidate chitinase; Glycoside hydrolase family 18.
  
   
 0.477
AFK03840.1
KEGG: fjo:Fjoh_0772 hypothetical protein; SPTR: Candidate alpha-L-fucosidase; Glycoside hydrolase family 95.
  
     0.411
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.