STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02540.1KEGG: dfe:Dfer_5678 hypothetical protein; SPTR: Putative uncharacterized protein. (343 aa)    
Predicted Functional Partners:
AFK05062.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: dfe:Dfer_5479 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; SPTR: Glutamate synthase (Ferredoxin).
    
 
 0.864
AFK03258.1
Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein.
 
     0.761
AFK02441.1
PFAM: Acetyl xylan esterase (AXE1); InterPro IPR008391; KEGG: acetyl xylan esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl xylan esterase.
  
     0.702
AFK02383.1
InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel.
  
    0.636
AFK03564.1
KEGG: sli:Slin_3971 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.606
AFK01803.1
Putative O-antigen-like protein; PFAM: Prolyl oligopeptidase family; KEGG: bfs:BF4091 putative O-antigen-like protein; SPTR: Putative uncharacterized protein.
  
   
 0.585
AFK02524.1
FG-GAP repeat protein; InterPro IPR013517; KEGG: sli:Slin_6339 FG-GAP repeat protein; PFAM: FG-GAP; SPTR: FG-GAP repeat protein.
  
     0.580
AFK02435.1
Membrane-bound dehydrogenase domain protein; PFAM: Copper binding proteins, plastocyanin/azurin family; Trehalose utilisation; CARDB; TIGRFAM: putative membrane-bound dehydrogenase domain; COGs: COG3828 conserved hypothetical protein; InterPro IPR013428:IPR009381:IPR011635:IPR000923; KEGG: sli:Slin_0511 dehydrogenase; PFAM: Blue (type 1) copper domain; APHP; Protein of unknown function DUF1037; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: Putative membrane-bound dehydrogenase.
  
     0.542
AFK01873.1
PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: sli:Slin_5453 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: Putative uncharacterized protein.
  
     0.530
AFK02401.1
KEGG: sli:Slin_6343 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.523
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.