STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02592.1Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sli:Slin_1650 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin. (548 aa)    
Predicted Functional Partners:
AFK02590.1
Hypothetical protein; TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: hypothetical protein; SPTR: Pyrroloquinoline quinone biosynthesis protein PqqB.
       0.757
AFK02591.1
PFAM: Protein of unknown function (DUF2807).
       0.757
AFK03815.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: OmpA family; PPIC-type PPIASE domain; InterPro IPR000297; KEGG: sli:Slin_0807 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
 
 
 
 0.681
AFK02795.1
Hypothetical protein; PFAM: Peptidase family C25; KEGG: dfe:Dfer_4246 hypothetical protein; SPTR: Fjo24.
  
    0.655
AFK02808.1
PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG0194 Guanylate kinase; InterPro IPR008144:IPR017665:IPR008145; KEGG: lby:Lbys_1680 guanylate kinase; PFAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group.
    
  0.652
AFK02933.1
Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: sli:Slin_4435 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH).
  
     0.577
AFK04596.1
Hypothetical protein; PFAM: Developmentally Regulated MAPK Interacting Protein; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.562
AFK04511.1
Hypothetical protein; PFAM: Developmentally Regulated MAPK Interacting Protein; KEGG: hau:Haur_1811 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.558
AFK01861.1
KEGG: dfe:Dfer_2973 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.537
AFK02589.1
KEGG: dfe:Dfer_3046 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.520
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.