STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02608.1Regulatory protein MarR; PFAM: MarR family; InterPro IPR000835; KEGG: dfe:Dfer_2571 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family with acetyltransferase activity. (162 aa)    
Predicted Functional Partners:
AFK02605.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: cpi:Cpin_5761 MarR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; SPTR: Transcriptional regulator, MarR family with acetyltransferase activity.
     0.973
AFK02607.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: aba:Acid345_2254 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.
 
     0.620
AFK02606.1
PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: Aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; SPTR: Aromatic-L-amino-acid decarboxylase.
       0.559
AFK02609.1
Protein of unknown function DUF2086; PFAM: Uncharacterized protein conserved in bacteria (DUF2086); COGs: COG3826 conserved hypothetical protein; InterPro IPR018655; KEGG: fjo:Fjoh_1574 hypothetical protein; PFAM: Protein of unknown function DUF2086; SPTR: Uncharacterized protein.
       0.511
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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