STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02682.1Hypothetical protein; PFAM: Bacterial SH3 domain. (262 aa)    
Predicted Functional Partners:
AFK02681.1
PFAM: Fibronectin type III domain; COGs: COG3179 chitinase; InterPro IPR003961; KEGG: sli:Slin_4301 fibronectin type III domain protein; PFAM: Fibronectin, type III; SPTR: Fibronectin type III domain protein.
       0.773
AFK02683.1
Hypothetical protein; COGs: COG3179 chitinase; KEGG: geb:GM18_4376 glycoside hydrolase family 19; SPTR: Chitinase class I family protein.
       0.686
AFK02684.1
KEGG: pmy:Pmen_0113 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.686
AFK02685.1
Hypothetical protein.
       0.686
AFK02686.1
PFAM: Insertion element protein; InterPro IPR003220; KEGG: fjo:Fjoh_2680 IS1 transposase; PFAM: Insertion element protein; SPTR: IS1 transposase.
       0.457
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.