STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02757.1KEGG: lby:Lbys_2764 hypothetical protein; SPTR: Putative uncharacterized protein. (169 aa)    
Predicted Functional Partners:
AFK02661.1
KEGG: lby:Lbys_2711 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFK04639.1
D-alanine--D-alanine ligase domain protein; PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR011127; KEGG: lby:Lbys_3538 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, N-terminal; SPTR: D-alanine--D-alanine ligase.
  
     0.746
AFK02447.1
PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: lby:Lbys_1722 gliding motility-associated protein gldm; SPTR: Gliding motility-associated protein GldM; TIGRFAM: Gliding motility-associated protein GldM.
  
     0.733
AFK02446.1
TIGRFAM: gliding motility associated protien GldN; InterPro IPR019847; KEGG: sli:Slin_3222 gliding motility associated protein GldN; SPTR: Gliding motility associated protein GldN; TIGRFAM: Gliding motility associated protein GldN.
  
     0.731
AFK03220.1
KEGG: lby:Lbys_2391 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
AFK02638.1
Hypothetical protein; PFAM: Domain of Unknown Function (DUF349); KEGG: lby:Lbys_1946 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
AFK02918.1
KEGG: sli:Slin_5618 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.701
AFK03734.1
KEGG: lby:Lbys_3483 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.701
AFK03118.1
KEGG: lby:Lbys_2285 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
AFK03281.1
KEGG: dfe:Dfer_4376 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.686
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.