STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02766.1PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; COGs: COG0260 Leucyl aminopeptidase; HAMAP: cytosol aminopeptidase; InterPro IPR008283:IPR000819; KEGG: sli:Slin_4525 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; SPTR: Probable cytosol aminopeptidase. (507 aa)    
Predicted Functional Partners:
AFK04897.1
PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: dfe:Dfer_4878 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Peptidase M1 membrane alanine aminopeptidase.
   
 0.915
AFK05196.1
Carboxylate-amine ligase ybdK; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: carboxylate-amine ligase, YbdK family; COGs: COG2170 conserved hypothetical protein; HAMAP: Carboxylate-amine ligase ybdK; InterPro IPR011793:IPR006336; KEGG: dfe:Dfer_0436 carboxylate-amine ligase; PFAM: Glutamate--cysteine ligase, GCS2; SPTR: Carboxylate-amine ligase Dfer_0436; TIGRFAM: Carboxylate-amine ligase, predicted.
  
  
  0.915
AFK01706.1
Gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: lby:Lbys_3060 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase.
     
 0.913
AFK03099.1
Gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: sli:Slin_2683 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase.
     
 0.913
AFK03842.1
PFAM: Serine hydroxymethyltransferase; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: dfe:Dfer_3814 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase.
  
 
 0.836
AFK03141.1
PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: lby:Lbys_2637 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II.
   
  0.818
AFK02130.1
PFAM: Aminotransferase class I and II; COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR004839; KEGG: glo:Glov_2977 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II.
  
 
  0.807
AFK01608.1
PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: lby:Lbys_2373 O-acetylhomoserine sulfhydrolase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: O-acetylhomoserine sulfhydrolase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase.
     
  0.800
AFK02767.1
Esterase; PFAM: Putative esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: lby:Lbys_2306 esterase; PFAM: Putative esterase; SPTR: Esterase.
 
     0.703
AFK05305.1
PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: lby:Lbys_0233 deoxynucleoside kinase; PFAM: Deoxynucleoside kinase; SPTR: Deoxynucleoside kinase.
   
 0.691
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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