STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02794.1KEGG: dfe:Dfer_4247 hypothetical protein; SPTR: Putative uncharacterized protein. (392 aa)    
Predicted Functional Partners:
AFK05040.1
KEGG: sli:Slin_6621 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.967
AFK02795.1
Hypothetical protein; PFAM: Peptidase family C25; KEGG: dfe:Dfer_4246 hypothetical protein; SPTR: Fjo24.
 
   
 0.890
AFK03647.1
KEGG: lby:Lbys_2722 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.781
AFK01693.1
Tetratricopeptide TPR_2 repeat-containing protein; InterPro IPR019734:IPR013105:IPR001440; KEGG: sli:Slin_3219 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein.
  
   
 0.777
AFK02816.1
PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: lby:Lbys_2640 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; SPTR: Peptidoglycan glycosyltransferase.
  
 0.776
AFK04017.1
Penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790:IPR005311:IPR001460; KEGG: lby:Lbys_1222 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; SPTR: Peptidoglycan glycosyltransferase; TIGRFAM: Penicillin-binding protein 2.
  
 0.776
AFK01876.1
KEGG: lby:Lbys_3396 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFK02933.1
Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: sli:Slin_4435 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH).
  
    0.774
AFK01723.1
PFAM: PglZ domain; Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR013973; KEGG: sli:Slin_3042 response regulator receiver protein; PFAM: PglZ domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.
  
   
 0.766
AFK04842.1
KEGG: dfe:Dfer_4777 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.762
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.