STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK02860.1Hypothetical protein; PFAM: Phytanoyl-CoA dioxygenase (PhyH); KEGG: fbc:FB2170_06930 hypothetical protein; SPTR: Putative uncharacterized protein. (333 aa)    
Predicted Functional Partners:
AFK02859.1
PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fbc:FB2170_06925 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator.
 
    0.563
AFK03394.1
PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: dfe:Dfer_1973 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase.
  
     0.498
AFK02385.1
Heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013427:IPR004155; KEGG: heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat; SPTR: Heme-binding protein; TIGRFAM: Putative haem-binding region.
  
     0.497
AFK02861.1
PFAM: Aldo/keto reductase family; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: methylglyoxal reductase (NADPH-dependent); PFAM: Aldo/keto reductase; SPTR: 2,5-didehydrogluconate reductase.
  
    0.480
AFK02423.1
Hypothetical protein; PFAM: Trehalose utilisation; KEGG: hypothetical protein; SPTR: Signal peptide and transmembrane prediction.
  
     0.462
AFK04693.1
Rieske (2Fe-2S) iron-sulfur domain-containing protein; PFAM: Rieske [2Fe-2S] domain; InterPro IPR017941; KEGG: sli:Slin_1876 Rieske (2Fe-2S) iron-sulphur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) iron-sulphur domain protein.
  
     0.450
AFK01835.1
Rieske (2Fe-2S) iron-sulfur domain-containing protein; PFAM: Rieske [2Fe-2S] domain; InterPro IPR017941; KEGG: sli:Slin_4885 Rieske (2Fe-2S) iron-sulphur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) iron-sulphur domain protein.
  
    0.419
AFK03271.1
KEGG: sli:Slin_3623 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.409
AFK02198.1
KEGG: gfo:GFO_1536 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.