STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03028.1PFAM: Beta-lactamase; Domain of unknown function (DUF3471); COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sli:Slin_2987 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase. (517 aa)    
Predicted Functional Partners:
AFK01984.1
Beta-lactamase; PFAM: D-alanyl-D-alanine carboxypeptidase; COGs: COG2367 Beta-lactamase class A; KEGG: sli:Slin_5194 beta-lactamase; SPTR: Beta-lactamase.
 
   
 0.927
AFK02013.1
Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR001375; KEGG: sli:Slin_6131 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein.
 
      0.865
AFK03121.1
Peptidase S9 prolyl oligopeptidase active site domain-containing protein; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR001375; KEGG: peptidase S9 prolyl oligopeptidase active site domain-containing protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein.
 
     0.726
AFK03027.1
Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dfe:Dfer_5643 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR.
       0.634
AFK05396.1
PFAM: Predicted periplasmic protein (DUF2233); COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.444
AFK03696.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.414
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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