STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03044.1Beta-lactamase domain-containing protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR006311; KEGG: beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein. (299 aa)    
Predicted Functional Partners:
AFK03045.1
Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dal:Dalk_4285 beta-lactamase domain protein; SPTR: Metallo-beta-lactamase family protein.
       0.592
AFK03043.1
PFAM: NUMOD4 motif; KEGG: dfe:Dfer_5063 NUMOD4 domain-containing protein; SPTR: NUMOD4 domain-containing protein.
       0.522
AFK04687.1
Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; InterPro IPR001123; KEGG: lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein.
  
     0.511
AFK03856.1
KEGG: putative lipoprotein; SPTR: Putative lipoprotein.
  
     0.480
AFK03435.1
Globin; PFAM: Bacterial-like globin; InterPro IPR001486; KEGG: tet:TTHERM_01044760 protozoan/cyanobacterial globin family protein; PFAM: Globin, truncated bacterial-like; SPTR: Protozoan/cyanobacterial globin family protein.
  
     0.436
AFK02948.1
PFAM: Phytanoyl-CoA dioxygenase (PhyH); InterPro IPR008775; KEGG: dfe:Dfer_3838 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase.
  
    0.429
AFK03046.1
ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; COGs: COG1200 RecG-like helicase; InterProIPR014001:IPR001650:IPR004609:IPR004365:IPR 011545; KEGG: dfe:Dfer_4892 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG.
       0.420
AFK02840.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.414
AFK01977.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: dar:Daro_3137 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Sulfide dehydrogenase (Flavocytochrome c) flavoprotein chain.
 
 
 0.410
AFK02002.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1083); KEGG: sli:Slin_4611 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.409
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.