STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03076.1PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR019868:IPR005532; KEGG: lby:Lbys_2605 gliding motility-associated lipoprotein gldj; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldJ; TIGRFAM: Gliding motility-associated lipoprotein GldJ-short. (429 aa)    
Predicted Functional Partners:
AFK02448.1
TIGRFAM: gliding motility-associated protein GldL; InterPro IPR019852; KEGG: lby:Lbys_1723 gliding motility-associated protein gldl; SPTR: Gliding motility-associated protein GldL; TIGRFAM: Gliding motility-associated protein, GldL.
 
   
 0.809
AFK01832.1
TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: dfe:Dfer_4560 protein involved in gliding motility GldD; SPTR: Protein involved in gliding motility GldD; TIGRFAM: Gliding motility-associated lipoprotein, GldD.
  
   
 0.807
AFK03336.1
Hypothetical protein; TIGRFAM: gliding motility-associated lipoprotein GldB; KEGG: lby:Lbys_2934 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.804
AFK02447.1
PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: lby:Lbys_1722 gliding motility-associated protein gldm; SPTR: Gliding motility-associated protein GldM; TIGRFAM: Gliding motility-associated protein GldM.
 
   
 0.789
AFK03476.1
PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019863:IPR019196; KEGG: lby:Lbys_2296 gliding-associated ABC transporter substrate-binding component gldg; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding-associated putative ABC transporter substrate-binding component GldG; TIGRFAM: Gliding-associated putative ABC transporter substrate-binding GldG.
  
   
 0.778
AFK03662.1
TIGRFAM: gliding motility-associated lipoprotein GldH; InterPro IPR020018; KEGG: sli:Slin_5969 gliding motility-associated lipoprotein GldH; SPTR: Gliding motility-associated lipoprotein GldH; TIGRFAM: Gliding motility-associated lipoprotein, GldH.
  
   
 0.769
AFK04585.1
Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: psn:Pedsa_3611 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: Sulfatase-modifying factor 1.
  
   
 0.761
AFK03647.1
KEGG: lby:Lbys_2722 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.759
AFK03195.1
Putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: dfe:Dfer_3688 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes.
 
     0.755
AFK02688.1
Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: sulfatase-modifying factor protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein.
  
   
 0.752
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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