STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03407.1Hypothetical protein; PFAM: Domain of Unknown Function (DUF1080); KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (223 aa)    
Predicted Functional Partners:
AFK03408.1
PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: tva:TVAG_157410 Clan SC, family S33, methylesterase-like serine peptidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase family protein.
     0.922
AFK03409.1
PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: cpi:Cpin_4454 DinB family protein; PFAM: DinB; SPTR: DinB family protein.
 
     0.792
AFK03410.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cpi:Cpin_4453 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family.
 
     0.566
AFK01746.1
PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: rbi:RB2501_13119 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: Putative uncharacterized protein.
  
     0.421
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.