STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03481.1Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: lbf:LBF_2545 lipase/phospolipase; PFAM: Lipase, GDSL; SPTR: Putative uncharacterized protein. (282 aa)    
Predicted Functional Partners:
AFK03482.1
PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: pau:PA14_48190 putative transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Probable transcriptional regulator.
 
     0.620
AFK02272.1
KEGG: tye:THEYE_A1956 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
AFK03733.1
PFAM: Domain of unknown function DUF11; Cna protein B-type domain; TIGRFAM: conserved repeat domain; InterPro IPR008454:IPR001434; KEGG: sli:Slin_3586 hypothetical protein; PFAM: Protein of unknown function DUF11; Collagen-binding surface protein Cna-like, B region; SPTR: Conserved repeat domain protein; TIGRFAM: Protein of unknown function DUF11.
  
 
   0.527
AFK01558.1
Hypothetical protein; PFAM: PA14 domain; KEGG: atm:ANT_19330 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.506
AFK04405.1
KEGG: FG-GAP repeat-containing protein; SPTR: FG-GAP repeat protein.
  
 
   0.504
AFK03480.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_4094 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase.
       0.466
AFK03483.1
Alpha/beta hydrolase-like protein; COGs: COG4757 alpha/beta hydrolase; KEGG: alpha/beta hydrolase-like protein; SPTR: Predicted protein.
       0.448
AFK04089.1
PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG5305 membrane protein; KEGG: sli:Slin_2543 hypothetical protein; SPTR: Membrane protein-like protein.
  
     0.444
AFK03897.1
Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: G-D-S-L family lipolytic protein; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family.
  
     0.422
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.