STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03515.1KEGG: psn:Pedsa_0016 FAD dependent oxidoreductase; SPTR: Glucose-inhibited division protein A. (612 aa)    
Predicted Functional Partners:
AFK03514.1
Hypothetical protein; KEGG: srm:SRM_00103 conserved hypothetical protein, probable TolB periplasmic receptor; SPTR: Putative orphan protein; putative signal peptide.
       0.686
AFK05095.1
PFAM: Electron transfer flavoprotein domain; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: dfe:Dfer_1240 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.659
AFK03513.1
Double-transmembrane region domain protein; PFAM: Aerotolerance regulator N-terminal; CARDB; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933:IPR011445; KEGG: dfe:Dfer_5768 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Double-transmembrane region, N-terminal.
  
  
 0.493
AFK05094.1
PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: lby:Lbys_0439 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein alpha subunit.
  
 
 0.430
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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