STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03741.1PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dfe:Dfer_4773 hypothetical protein; PFAM: Protein of unknown function DUF58; SPTR: Putative uncharacterized protein. (298 aa)    
Predicted Functional Partners:
AFK03742.1
PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; COGs: COG0797 Lipoprotein; InterPro IPR005132:IPR012997; KEGG: lby:Lbys_3042 rare lipoprotein A; PFAM: Rare lipoprotein A; SPTR: Rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial.
       0.797
AFK03513.1
Double-transmembrane region domain protein; PFAM: Aerotolerance regulator N-terminal; CARDB; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933:IPR011445; KEGG: dfe:Dfer_5768 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Double-transmembrane region, N-terminal.
 
  
 0.791
AFK05203.1
KEGG: sli:Slin_1353 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.785
AFK03817.1
PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: sli:Slin_0805 ATPase AAA; PFAM: ATPase associated with various cellular activities, AAA-3; SPTR: ATPase associated with various cellular activities AAA_3.
 
  
 0.781
AFK05342.1
KEGG: sli:Slin_1374 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.779
AFK03072.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: dfe:Dfer_3800 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFK05359.1
KEGG: sli:Slin_0793 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFK02181.1
KEGG: dfe:Dfer_2569 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFK03069.1
KEGG: lby:Lbys_2589 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein.
 
    0.761
AFK02743.1
PFAM: von Willebrand factor type A domain; COGs: COG1240 Mg-chelatase subunit ChlD; InterPro IPR002035; KEGG: dfe:Dfer_3846 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A.
 
  
 0.736
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.