STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03758.1PFAM: Protein of unknown function (DUF2837); KEGG: cbl:CLK_0744 hypothetical protein; SPTR: Putative membrane protein. (268 aa)    
Predicted Functional Partners:
AFK03759.1
Hypothetical protein.
       0.773
AFK03760.1
Hypothetical protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: hypothetical protein; SPTR: Putative Acetyltransferase (The isoleucine patch superfamily).
       0.732
AFK03761.1
PFAM: Prokaryotic protein of unknown function (DUF849); COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF849, prokaryotic; SPTR: Putative uncharacterized protein.
       0.732
AFK03757.1
AAA ATPase; PFAM: Type III restriction enzyme, res subunit; TIGRFAM: DNA helicase, putative; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR003593; KEGG: sli:Slin_3380 ATPase AAA; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase.
       0.542
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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