STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03846.1PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sli:Slin_3014 beta-lactamase; SPTR: Beta-lactamase domain protein. (223 aa)    
Predicted Functional Partners:
AFK03554.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: psn:Pedsa_3413 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-lactate dehydrogenase.
   
 0.906
AFK02745.1
PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: azl:AZL_009100 D-lactate dehydrogenase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; SPTR: D-lactate dehydrogenase.
     
 0.901
AFK01562.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG0346 Lactoylglutathione lyase and related lyase; InterPro IPR004360; KEGG: sli:Slin_0281 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.900
AFK02396.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.900
AFK03847.1
PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; KEGG: dfe:Dfer_5069 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
       0.661
AFK03845.1
PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: dfe:Dfer_5066 CDP-diacylglycerol/serineO-phosphatidyltransfera se; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol/serineO-phosphatidyltransfera se; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase.
  
    0.655
AFK03844.1
KEGG: lby:Lbys_0225 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.456
AFK03848.1
Selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; COGs: COG0709 Selenophosphate synthase; HAMAP: Selenide, water dikinase; InterPro IPR000728:IPR010918:IPR004536; KEGG: sli:Slin_3011 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Selenide, water dikinase; TIGRFAM: Selenide water dikinase.
       0.441
AFK04382.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: hba:Hbal_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putidaredoxin reductase.
 
 
 0.404
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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