STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03862.1PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: ran:Riean_0486 thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase. (203 aa)    
Predicted Functional Partners:
AFK03860.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ran:Riean_0488 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase.
 
 
   0.946
AFK02362.1
Thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR000728:IPR010918:IPR006283; KEGG: mtt:Ftrac_1576 thiamine-phosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Thiamine-phosphate kinase; TIGRFAM: Thiamine-monophosphate kinase.
    
 0.928
AFK03861.1
PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728:IPR010918; KEGG: ran:Riean_0487 air synthase related protein domain protein; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; SPTR: Putative AIR synthase domain protein.
 
     0.913
AFK02805.1
Ribosome biogenesis GTPase RsgA; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; COGs: COG1162 GTPase; HAMAP: ribosome biogenesis GTPase RsgA; InterPro IPR004881; KEGG: sli:Slin_5830 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; SPTR: Putative ribosome biogenesis GTPase RsgA; TIGRFAM: GTPase EngC.
     
 0.910
AFK03863.1
Protein of unknown function DUF343; PFAM: Trm112p-like protein; InterPro IPR005651; KEGG: mtt:Ftrac_2331 hypothetical protein; PFAM: Protein of unknown function DUF343; SPTR: Putative uncharacterized protein.
       0.793
AFK03231.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: gob:Gobs_4247 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Molybdopterin biosynthesis protein.
  
  
 0.791
AFK04736.1
COGs: COG0226 ABC-type phosphate transport system periplasmic component; KEGG: lby:Lbys_3216 phosphate ABC transporter, phosphate-binding component; SPTR: Putative phosphate ABC transporter, phosphate-binding component.
   
    0.624
AFK02312.1
PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: GTP cyclohydrolase-2; InterPro IPR000422:IPR000926; KEGG: lby:Lbys_1704 gtp cyclohydrolase II; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis protein ribBA; TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II.
     
 0.406
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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