STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03897.1Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: G-D-S-L family lipolytic protein; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family. (224 aa)    
Predicted Functional Partners:
AFK03898.1
PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: lby:Lbys_3258 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase.
     
 0.591
AFK03899.1
KEGG: cpi:Cpin_2139 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.569
AFK01874.1
PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR006311; KEGG: dfe:Dfer_5021 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel.
  
     0.513
AFK02890.1
PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR006311; KEGG: lby:Lbys_0660 xylose isomerase domaiN-containing protein tim barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain-containing protein TIM barrel.
  
     0.506
AFK02377.1
PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: sli:Slin_0334 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel.
  
     0.497
AFK01493.1
PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: lby:Lbys_0675 xylose isomerase domaiN-containing protein tim barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain-containing protein TIM barrel.
  
     0.484
AFK03896.1
PFAM: Protein of unknown function (DUF3244); KEGG: sli:Slin_4775 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.472
AFK03481.1
Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: lbf:LBF_2545 lipase/phospolipase; PFAM: Lipase, GDSL; SPTR: Putative uncharacterized protein.
  
     0.422
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.