STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK03967.1KEGG: mtt:Ftrac_3728 hypothetical protein; SPTR: Putative uncharacterized protein. (317 aa)    
Predicted Functional Partners:
AFK03968.1
KEGG: lby:Lbys_2426 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.757
AFK04405.1
KEGG: FG-GAP repeat-containing protein; SPTR: FG-GAP repeat protein.
  
 
  0.610
AFK01548.1
KEGG: cao:Celal_2348 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.584
AFK03733.1
PFAM: Domain of unknown function DUF11; Cna protein B-type domain; TIGRFAM: conserved repeat domain; InterPro IPR008454:IPR001434; KEGG: sli:Slin_3586 hypothetical protein; PFAM: Protein of unknown function DUF11; Collagen-binding surface protein Cna-like, B region; SPTR: Conserved repeat domain protein; TIGRFAM: Protein of unknown function DUF11.
  
 
  0.569
AFK03856.1
KEGG: putative lipoprotein; SPTR: Putative lipoprotein.
  
     0.541
AFK02779.1
PFAM: MerC mercury resistance protein; KEGG: xal:XALc_0155 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.531
AFK01925.1
Fibronectin type III domain protein; COGs: COG3179 chitinase; InterPro IPR003961; KEGG: mtt:Ftrac_0573 hypothetical protein; PFAM: Fibronectin, type III; SPTR: Putative uncharacterized protein.
  
     0.505
AFK04147.1
Hypothetical protein; KEGG: ddd:Dda3937_01477 putative hemagglutinin/hemolysin-related protein; SPTR: Putative hemagglutinin/hemolysin-related protein.
  
 
  0.439
AFK02177.1
KEGG: sli:Slin_4924 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.426
AFK02055.1
KEGG: dal:Dalk_4019 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.425
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.