STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04068.12,3-bisphosphoglycerate-independent phosphoglycerate mutase; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR005995:IPR011258:IPR006124; KEGG: lby:Lbys_1671 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3 [...] (511 aa)    
Predicted Functional Partners:
AFK04631.1
PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: lby:Lbys_0613 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; SPTR: Enolase; TIGRFAM: Enolase.
 
 0.990
AFK04280.1
PFAM: Phosphoglycerate kinase; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: dfe:Dfer_2700 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase.
  
 
 0.984
AFK03650.1
HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912:IPR006383; KEGG: dfe:Dfer_4690 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, cataly [...]
  
 
 0.935
AFK01955.1
RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro IPR000504; KEGG: dfe:Dfer_2980 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1; SPTR: RNP-1 like RNA-binding protein.
   
 0.931
AFK03781.1
RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: chu:CHU_2407 RNA binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1; SPTR: RNP-1 like RNA-binding protein.
   
 0.931
AFK02906.1
PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: lby:Lbys_2607 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase.
   
 0.913
AFK05439.1
PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: sli:Slin_1926 glycerate kinase; PFAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: Glycerate kinase.
     
 0.912
AFK02397.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-3-phosphoglycerate dehydrogenase.
    
  0.908
AFK05024.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: dfe:Dfer_0419 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
    
 0.902
AFK05422.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: sfr:Sfri_2837 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: Phosphoglycerate dehydrogenase.
    
 0.902
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.