STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04168.1KEGG: sli:Slin_3973 hypothetical protein; SPTR: Putative uncharacterized protein. (193 aa)    
Predicted Functional Partners:
AFK01522.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: lby:Lbys_2760 cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO.
  
  
 0.931
AFK02338.1
PFAM: Carbohydrate-selective porin, OprB family; InterPro IPR007049; KEGG: ppn:Palpr_0309 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; SPTR: Carbohydrate-selective porin OprB.
     
 0.728
AFK03078.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: dfe:Dfer_4378 polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2; SPTR: Polyphosphate:AMP phosphotransferase; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
   
    0.559
AFK04169.1
ATP-binding region ATPase domain protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594:IPR020576; KEGG: lby:Lbys_3181 ATP-binding region ATPase domain protein; PFAM: ATP-binding region, ATPase-like; Heat shock protein Hsp90, C-terminal; SMART: ATP-binding region, ATPase-like; SPTR: ATP-binding region ATPase domain protein.
       0.513
AFK02466.1
KEGG: lby:Lbys_3569 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.487
AFK03693.1
KEGG: dfe:Dfer_2485 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.487
AFK04671.1
KEGG: lby:Lbys_1511 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.487
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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