STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04217.1KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (197 aa)    
Predicted Functional Partners:
AFK04216.1
PFAM: FAD binding domain; GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family.
 
   0.900
AFK02153.1
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: dfe:Dfer_2494 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.801
AFK04760.1
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: sli:Slin_5620 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.801
AFK01606.1
FAD dependent oxidoreductase; PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: sli:Slin_0454 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.800
AFK02000.1
FAD dependent oxidoreductase; PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.800
AFK02364.1
FAD dependent oxidoreductase; PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: sli:Slin_1891 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.800
AFK02381.1
PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: sli:Slin_5806 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.800
AFK03360.1
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.800
AFK03722.1
FAD dependent oxidoreductase; PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: sli:Slin_1025 choline dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Choline dehydrogenase.
 
   0.794
AFK03024.1
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: sli:Slin_1371 glucose-methanol-choline oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Glucose-methanol-choline oxidoreductase.
 
   0.773
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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