STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04282.1KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (382 aa)    
Predicted Functional Partners:
AFK04432.1
KEGG: ang:ANI_1_2070014 hypothetical protein; SPTR: Pc22g23380 protein.
  
     0.763
AFK04373.1
Transcriptional regulator, SARP family; PFAM: Bacterial transcriptional activator domain; COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR019734:IPR001440; KEGG: bbt:BBta_1607 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
  
     0.762
AFK03327.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: cytochrome c, class I; PFAM: Cytochrome c, class I; SPTR: Putative uncharacterized protein.
  
    0.739
AFK04670.1
KEGG: art:Arth_0949 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.737
AFK01860.1
Hypothetical protein; PFAM: BNR/Asp-box repeat; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.725
AFK03931.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
AFK05086.1
KEGG: cly:Celly_1637 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
AFK04281.1
KEGG: sli:Slin_2429 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.628
AFK04441.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.611
AFK05157.1
Neuraminidase (sialidase)-like protein; COGs: COG4692 neuraminidase (sialidase); KEGG: neuraminidase (sialidase)-like protein; SPTR: Neuraminidase (Sialidase)-like protein.
  
     0.582
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.