STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04404.1PFAM: Alpha amylase, catalytic domain; InterPro IPR006589:IPR006047; KEGG: gct:GC56T3_3190 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha-amylase, putative. (775 aa)    
Predicted Functional Partners:
AFK04755.1
TIGRFAM: trehalose synthase-fused probable maltokinase; COGs: COG3281 Uncharacterized protein probably involved in trehalose biosynthesis; KEGG: sli:Slin_0399 trehalose synthase-fused maltokinase-like protein; SPTR: Trehalose synthase-fused maltokinase-like protein.
  
 0.955
AFK04799.1
Alpha amylase catalytic region; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193:IPR006047:IPR006589; KEGG: sli:Slin_0361 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region.
 
 
 0.936
AFK02246.1
1,4-alpha-glucan-branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; COGs: COG0296 1 4-alpha-glucan branching enzyme; HAMAP: 1,4-alpha-glucan branching enzyme, core region; InterProIPR006589:IPR006407:IPR004193:IPR006047:IPR 006048; KEGG: lby:Lbys_3517 1,4-alpha-glucan branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic [...]
  
 
 0.927
AFK02853.1
TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: dfe:Dfer_3228 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: Alpha-glucan phosphorylase; TIGRFAM: Alpha-glucan phosphorylase.
  
 0.927
AFK01863.1
PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: sli:Slin_0058 glycoside hydrolase 97; PFAM: Glycoside hydrolase 97; SPTR: Glycoside hydrolase 97.
 
  
 0.916
AFK05163.1
PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196:IPR005195:IPR005194; KEGG: dfe:Dfer_2756 maltose phosphorylase; PFAM: Glycoside hydrolase family 65, central catalytic; Glycoside hydrolase family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; SPTR: Kojibiose phosphorylase.
  
 
 0.910
AFK01959.1
PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: sde:Sde_2499 putative alpha-glucosidase; PFAM: Glycoside hydrolase 97; SPTR: A-glucosidase-like protein.
    
0.901
AFK04432.1
KEGG: ang:ANI_1_2070014 hypothetical protein; SPTR: Pc22g23380 protein.
  
     0.666
AFK04373.1
Transcriptional regulator, SARP family; PFAM: Bacterial transcriptional activator domain; COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR019734:IPR001440; KEGG: bbt:BBta_1607 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
  
     0.662
AFK04434.1
Ig family protein; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase; Putative Ig domain; InterPro IPR013222:IPR019599:IPR008009; KEGG: alpha-galactosidase; PFAM: Putative Ig; Alpha-galactosidase, NEW1 domain; Glycosyl hydrolase family 98, putative carbohydrate-binding module; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase.
 
  
 0.632
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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