STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04441.1RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein. (620 aa)    
Predicted Functional Partners:
AFK04442.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662:IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug.
 
     0.933
AFK04432.1
KEGG: ang:ANI_1_2070014 hypothetical protein; SPTR: Pc22g23380 protein.
 
     0.826
AFK04436.1
Ig family protein; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase; Putative Ig domain; InterPro IPR013222:IPR019599:IPR008009; KEGG: alpha-galactosidase; PFAM: Putative Ig; Alpha-galactosidase, NEW1 domain; Glycosyl hydrolase family 98, putative carbohydrate-binding module; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase.
 
     0.774
AFK04373.1
Transcriptional regulator, SARP family; PFAM: Bacterial transcriptional activator domain; COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR019734:IPR001440; KEGG: bbt:BBta_1607 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
  
     0.754
AFK04434.1
Ig family protein; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase; Putative Ig domain; InterPro IPR013222:IPR019599:IPR008009; KEGG: alpha-galactosidase; PFAM: Putative Ig; Alpha-galactosidase, NEW1 domain; Glycosyl hydrolase family 98, putative carbohydrate-binding module; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase.
 
     0.739
AFK04440.1
PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein.
 
     0.697
AFK02290.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.675
AFK04437.1
Hypothetical protein; PFAM: Putative esterase; KEGG: sli:Slin_1343 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.626
AFK04282.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.611
AFK02251.1
PFAM: Glycosyl hydrolases family 28; GDSL-like Lipase/Acylhydrolase; COGs: COG5434 Endopygalactorunase; InterPro IPR006626:IPR001087:IPR000743; KEGG: polygalacturonase; PFAM: Glycoside hydrolase, family 28; Lipase, GDSL; SPTR: Glycoside hydrolase family 28.
 
 
 0.610
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.