STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04596.1Hypothetical protein; PFAM: Developmentally Regulated MAPK Interacting Protein; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (978 aa)    
Predicted Functional Partners:
AFK04597.1
PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: sli:Slin_2438 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aminotransferase class V.
       0.648
AFK02592.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sli:Slin_1650 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin.
  
   0.562
AFK04845.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sli:Slin_1650 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin.
  
   0.519
AFK02251.1
PFAM: Glycosyl hydrolases family 28; GDSL-like Lipase/Acylhydrolase; COGs: COG5434 Endopygalactorunase; InterPro IPR006626:IPR001087:IPR000743; KEGG: polygalacturonase; PFAM: Glycoside hydrolase, family 28; Lipase, GDSL; SPTR: Glycoside hydrolase family 28.
  
 
 0.489
AFK04047.1
PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR015171:IPR006047:IPR019492; KEGG: Cyclomaltodextrin glucanotransferase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha-amylase.
  
     0.475
AFK04049.1
KEGG: lby:Lbys_2309 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  0.425
AFK05165.1
PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR015171:IPR006047:IPR019492; KEGG: sli:Slin_2883 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region.
  
     0.420
AFK04598.1
Hypothetical protein.
       0.417
AFK04599.1
KEGG: ptm:GSPATT00031087001 hypothetical protein; SPTR: Chromosome undetermined scaffold_121, whole genome shotgun sequence.
       0.401
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.