STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04630.1PFAM: Septum formation initiator; InterPro IPR007060; KEGG: lby:Lbys_0614 septum formation initiator; PFAM: Septum formation initiator; SPTR: Septum formation initiator. (110 aa)    
Predicted Functional Partners:
AFK02978.1
KEGG: sli:Slin_4754 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.974
AFK04631.1
PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: lby:Lbys_0613 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; SPTR: Enolase; TIGRFAM: Enolase.
  
    0.622
AFK03662.1
TIGRFAM: gliding motility-associated lipoprotein GldH; InterPro IPR020018; KEGG: sli:Slin_5969 gliding motility-associated lipoprotein GldH; SPTR: Gliding motility-associated lipoprotein GldH; TIGRFAM: Gliding motility-associated lipoprotein, GldH.
  
     0.599
AFK01832.1
TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: dfe:Dfer_4560 protein involved in gliding motility GldD; SPTR: Protein involved in gliding motility GldD; TIGRFAM: Gliding motility-associated lipoprotein, GldD.
  
     0.583
AFK02816.1
PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: lby:Lbys_2640 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; SPTR: Peptidoglycan glycosyltransferase.
 
 0.583
AFK01661.1
PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR001854; KEGG: chu:CHU_3154 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29.
  
     0.546
AFK03476.1
PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019863:IPR019196; KEGG: lby:Lbys_2296 gliding-associated ABC transporter substrate-binding component gldg; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding-associated putative ABC transporter substrate-binding component GldG; TIGRFAM: Gliding-associated putative ABC transporter substrate-binding GldG.
  
     0.545
AFK04262.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR003538:IPR006260; KEGG: dfe:Dfer_4058 TonB family protein; PFAM: Gram-negative bacterial tonB protein; SPTR: TonB family protein; TIGRFAM: TonB, C-terminal.
  
     0.537
AFK04290.1
KEGG: lby:Lbys_1770 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.526
AFK03934.1
PFAM: ATP-dependent Clp protease adaptor protein ClpS; InterPro IPR003769; KEGG: sli:Slin_1599 ATP-dependent Clp protease adaptor protein ClpS; PFAM: Adaptor protein ClpS, core; SPTR: ATP-dependent Clp protease adaptor protein ClpS.
  
     0.524
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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