STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04649.1KEGG: lby:Lbys_1591 hypothetical protein; SPTR: Putative uncharacterized protein. (429 aa)    
Predicted Functional Partners:
AFK05090.1
PFAM: Protein of unknown function (DUF3098); KEGG: lby:Lbys_0062 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFK03162.1
KEGG: lby:Lbys_2898 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFK03445.1
KEGG: dfe:Dfer_3845 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFK03220.1
KEGG: lby:Lbys_2391 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFK01829.1
KEGG: lby:Lbys_1934 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFK04660.1
KEGG: lby:Lbys_3023 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFK03734.1
KEGG: lby:Lbys_3483 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFK04013.1
KEGG: sli:Slin_2995 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFK03118.1
KEGG: lby:Lbys_2285 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AFK05310.1
PFAM: Bacterial SH3 domain; InterPro IPR013247; KEGG: lby:Lbys_0760 hypothetical protein; PFAM: SH3, type 3; SPTR: Putative uncharacterized protein.
  
     0.764
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.