STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04676.1KEGG: sli:Slin_1922 hypothetical protein; SPTR: Putative uncharacterized protein. (185 aa)    
Predicted Functional Partners:
AFK04677.1
PFAM: Protein of unknown function (DUF833); KEGG: sli:Slin_2497 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.631
AFK04675.1
Protein of unknown function DUF125 transmembrane; PFAM: VIT family; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: sli:Slin_1499 hypothetical protein; PFAM: Protein of unknown function DUF125, transmembrane; SPTR: Putative uncharacterized protein.
       0.605
AFK04674.1
KEGG: sli:Slin_1291 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.533
AFK04678.1
KEGG: sli:Slin_2509 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.482
AFK04679.1
YceI family protein; PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: sli:Slin_2531 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI family protein.
       0.482
AFK04680.1
KEGG: sli:Slin_2530 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.482
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.