STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04793.1PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR004607:IPR002376; KEGG: sli:Slin_4818 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase. (187 aa)    
Predicted Functional Partners:
AFK02472.1
PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR013982:IPR011607; KEGG: lby:Lbys_2838 phosphoribosylaminoimidazolecarboxamideformyltra nsferase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; SMART: AICARFT/IMPCHase bienzyme, formylation region; SPTR:Phosphoribosylaminoimidazolecarboxamideformylt ransferase.
 0.999
AFK03660.1
Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: lby:Lbys_3363 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthe [...]
 
 0.999
AFK05241.1
PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918; KEGG: fps:FP0695 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; SPTR: Phosphoribosylformylglycineamide synthase (FGAM synthase).
 
 
 0.997
AFK01632.1
PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: lby:Lbys_0999 5-(carboxyamino)imidazole ribonucleotide mutase; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: 5-(Carboxyamino)imidazole ribonucleotide mutase; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase.
 
  
 0.979
AFK03842.1
PFAM: Serine hydroxymethyltransferase; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: dfe:Dfer_3814 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase.
 
 0.970
AFK04590.1
PFAM: Glutamine amidotransferases class-II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: lby:Lbys_2013 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; SPTR: Amidophosphoribosyltransferase.
 
 
 0.970
AFK05112.1
Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR020630:IPR020631:IPR000672; KEGG: lby:Lbys_3183 5,10-methylenetetrahydrofolate dehydrogenase (nadp+); methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cycloh [...]
 
 
 0.970
AFK03796.1
PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR010918; KEGG: lby:Lbys_3050 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase.
 
  
 0.966
AFK01631.1
PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR005875:IPR003135; KEGG: dfe:Dfer_5765 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; SPTR: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit.
 
  
 0.960
AFK05060.1
PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro IPR001636; KEGG: lby:Lbys_1598 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase.
 
 
 0.946
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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