STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04840.1KEGG: hypothetical protein. (123 aa)    
Predicted Functional Partners:
AFK04841.1
Hypothetical protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: sli:Slin_3209 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.623
AFK04842.1
KEGG: dfe:Dfer_4777 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.623
AFK04839.1
Protein of unknown function UPF0029; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; COGs: COG1739 conserved hypothetical protein; InterPro IPR015796:IPR001498; KEGG: psn:Pedsa_0904 uncharacterized protein family UPF0029, Impact, N-terminal protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Uncharacterized protein family UPF0029, Impact, N-terminal protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact.
       0.612
AFK04838.1
Hypothetical protein; COGs: COG2388 acetyltransferase; KEGG: sli:Slin_3806 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.603
AFK04837.1
Kelch repeat type 1-containing protein; PFAM: Kelch motif; InterPro IPR006652; KEGG: sli:Slin_2899 kelch repeat-containing protein; PFAM: Kelch repeat type 1; SPTR: Kelch repeat-containing protein.
       0.422
AFK04843.1
PFAM: Protein of unknown function (DUF2911); KEGG: sli:Slin_1645 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.403
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.