STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK05005.1GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: hch:HCH_02203 histone acetyltransferase HPA2-like acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase. (162 aa)    
Predicted Functional Partners:
AFK05004.1
Methyltransferase type 11; PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: type 11 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 12.
       0.773
AFK02269.1
Thiol-disulfide oxidoreductase DCC; PFAM: Protein of unknown function, DUF393; COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: chu:CHU_2470 hypothetical protein; PFAM: Putative thiol-disulphide oxidoreductase DCC; SPTR: Putative uncharacterized protein.
 
      0.679
AFK05003.1
PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: sli:Slin_1772 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase.
       0.524
AFK04523.1
PFAM: Protein of unknown function (DUF1778); COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: lpp:lpp2984 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: Putative uncharacterized protein.
   
   0.472
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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